Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| salicylate hydroxylase | ASC78_01570 | O52379 | - | 343549 - 344814 | 48083.0 |
| lysr family transcriptional regulator | ASC78_01575 | Not Available | + | 344944 - 345858 | 33502.8 |
| iclr family transcriptional regulator | ASC78_01580 | Not Available | - | 345887 - 346699 | 28604.4 |
| mbl fold metallo-hydrolase | ASC78_01585 | Not Available | + | 346896 - 347855 | 35263.9 |
| fad-dependent oxidoreductase | ASC78_01590 | A0R1T4 | + | 347995 - 349632 | 60604.8 |
| hypothetical protein | ASC78_01595 | Not Available | + | 349645 - 349851 | 7242.44 |
| abc transporter substrate-binding protein | ASC78_01600 | P0A177 | + | 349884 - 350840 | 33310.2 |
| hypothetical protein | ASC78_01605 | Not Available | - | 350863 - 351177 | 11504.7 |
| hypothetical protein | ASC78_01610 | Not Available | + | 351538 - 352797 | 43100.5 |
| hypothetical protein | ASC78_01615 | Not Available | - | 352818 - 353747 | 33460.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.