Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase | ASC78_00110 | Not Available | + | 33870 - 35336 | 53476.8 |
| sulfurtransferase | ASC78_00115 | Not Available | - | 35431 - 37062 | 58358.1 |
| cysteine dioxygenase | ASC78_00120 | Q9I0N5 | - | 37059 - 37676 | 22196.1 |
| nitrate abc transporter substrate-binding protein | ASC78_00125 | Not Available | - | 37673 - 38662 | 34818.7 |
| acyl-coa dehydrogenase | ASC78_00130 | P96608 | - | 38659 - 39894 | 43749.9 |
| sulfonate abc transporter substrate-binding protein | ASC78_00135 | Not Available | + | 40004 - 41005 | 36082.8 |
| alkanesulfonate monooxygenase | ASC78_00140 | B2UAU3 | + | 41044 - 42153 | 40718.7 |
| hypothetical protein | ASC78_00145 | Q9L9F0 | + | 42298 - 43122 | 30038.4 |
| abc transporter substrate-binding protein | ASC78_00150 | Not Available | + | 43147 - 44148 | 35624.6 |
| sulfonate abc transporter permease | ASC78_00155 | Not Available | + | 44145 - 45227 | 38696.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.