Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase | ASC78_01360 | Q8YX96 | - | 300391 - 301335 | 33043.1 |
| hypothetical protein | ASC78_01365 | Not Available | - | 301351 - 302325 | 33735.9 |
| hypothetical protein | ASC78_01370 | Not Available | - | 302365 - 303369 | 35341.0 |
| mandelate racemase | ASC78_01375 | Not Available | - | 303380 - 304477 | 40090.5 |
| 3-oxoacyl-acp reductase | ASC78_01380 | Not Available | - | 304492 - 305274 | 26925.7 |
| hypothetical protein | ASC78_01385 | Not Available | - | 305457 - 306494 | 37200.8 |
| acetyl-coa acetyltransferase | ASC78_01390 | P14611 | - | 306534 - 307715 | 40358.6 |
| hypothetical protein | ASC78_01395 | P9WQ36 | - | 307712 - 309247 | 55528.9 |
| acyl-coa dehydrogenase | ASC78_01400 | Not Available | - | 309270 - 311048 | 62895.6 |
| acetyl-coa acetyltransferase | ASC78_01405 | Not Available | - | 311065 - 312249 | 41218.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.