Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ASC78_01260 | Not Available | + | 277792 - 279315 | 55322.9 |
| hypothetical protein | ASC78_01265 | Not Available | + | 279360 - 279863 | 18716.5 |
| acetyl-coenzyme a synthetase | ASC78_01270 | Q46Z41 | - | 279918 - 281885 | 71510.4 |
| acp s-malonyltransferase | ASC78_01275 | Not Available | - | 281936 - 282844 | 31998.3 |
| triphosphoribosyl-dephospho-coa synthase mdcb | ASC78_01280 | Q9RGM3 | - | 282841 - 283704 | 30160.4 |
| acp synthase | ASC78_01285 | Q4UZ66 | - | 283701 - 284393 | 24974.7 |
| biotin-independent malonate decarboxylase subunit gamma | ASC78_01290 | Not Available | - | 284411 - 285112 | 25314.7 |
| biotin-independent malonate decarboxylase subunit beta | ASC78_01295 | O06926 | - | 285133 - 286014 | 30716.1 |
| malonate decarboxylase acyl carrier protein | ASC78_01300 | Q93L23 | - | 286011 - 286343 | 11217.4 |
| malonate decarboxylase subunit alpha | ASC78_01305 | O06924 | - | 286358 - 288040 | 60815.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.