Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 980127 - 980217 | Not Available |
| stomatin 2 | ASC78_20380 | Q99JB2 | - | 980242 - 981171 | 33540.5 |
| hypothetical protein | ASC78_20385 | Not Available | - | 981197 - 981622 | 14730.9 |
| lysine decarboxylase | ASC78_20390 | Q9I2S7 | + | 981731 - 984034 | 86351.1 |
| atp-dependent dna ligase | ASC78_20395 | P44121 | - | 984073 - 984924 | 31147.6 |
| enoyl-acp reductase | ASC78_20400 | P0AEK5 | - | 984984 - 985766 | 27413.9 |
| peptide abc transporter substrate-binding protein | ASC78_20405 | Q8YC41 | + | 985804 - 987600 | 67425.1 |
| microcin abc transporter permease | ASC78_20410 | P0AFU1 | + | 987616 - 988650 | 38229.6 |
| peptide abc transporter permease | ASC78_20415 | P33915 | + | 988655 - 989686 | 38286.9 |
| microcin abc transporter atp-binding protein | ASC78_20420 | P33916 | + | 989692 - 991317 | 58572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.