Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | ASC78_20325 | B4E8V9 | - | 971626 - 972567 | 35065.4 |
| cobalamin biosynthesis protein cbix | ASC78_20330 | Not Available | - | 972631 - 973005 | 13371.4 |
| lps export abc transporter permease lptg | ASC78_20335 | P0ADC7 | - | 973017 - 974126 | 41470.6 |
| lps export abc transporter permease lptf | ASC78_20340 | Not Available | - | 974123 - 975259 | 41818.4 |
| aminopeptidase | ASC78_20345 | C5CLU5 | + | 975281 - 976816 | 52514.0 |
| dna polymerase iii subunit chi | ASC78_20350 | Not Available | + | 976813 - 977256 | 16318.4 |
| hypothetical protein | ASC78_20355 | Not Available | + | 977256 - 977660 | 14177.9 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC78_20360 | Not Available | + | 977796 - 979001 | 41556.0 |
| hypothetical protein | ASC78_20365 | Not Available | - | 979087 - 979479 | 14075.7 |
| hypothetical protein | ASC78_20370 | Not Available | - | 979587 - 979943 | 12740.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.