Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | ASC78_20175 | Not Available | - | 939624 - 940400 | 28950.0 |
| acyltransferase | ASC78_20180 | Not Available | - | 940367 - 941164 | 29397.7 |
| hypothetical protein | ASC78_20185 | O30478 | - | 941201 - 942238 | 37060.0 |
| dimethylmenaquinone methyltransferase | ASC78_20190 | Q2SN12 | - | 942241 - 943029 | 28401.4 |
| hypothetical protein | ASC78_20195 | A1TS27 | + | 943147 - 943872 | 26214.9 |
| phosphoribosylamine--glycine ligase | ASC78_20200 | Q8XXC4 | + | 943911 - 945209 | 46314.3 |
| coproporphyrinogen-iii oxidase, aerobic | ASC78_20205 | C5CLQ3 | + | 945209 - 946126 | 34231.6 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | ASC78_20210 | Q21WQ0 | + | 946117 - 946758 | 22671.3 |
| iojap family protein | ASC78_20215 | Q7P0P8 | + | 946758 - 947438 | 24253.4 |
| 50s rrna methyltransferase | ASC78_20220 | C5CLQ6 | + | 947435 - 947902 | 17209.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.