Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | ASC78_19970 | C5CKW1 | - | 899385 - 899567 | 6719.18 |
| tetraacyldisaccharide 4'-kinase | ASC78_19975 | Q21TN9 | - | 899548 - 900591 | 37774.5 |
| biopolymer transporter exbd | ASC78_19980 | Not Available | - | 900592 - 901017 | 15113.2 |
| flagellar motor protein mota | ASC78_19985 | P72604 | - | 901085 - 901717 | 22471.7 |
| exodeoxyribonuclease vii | ASC78_19990 | A9BWI7 | + | 902037 - 903335 | 46966.8 |
| hypothetical protein | ASC78_20000 | Not Available | - | 904248 - 904706 | 17127.0 |
| hypothetical protein | ASC78_20005 | Not Available | - | 904795 - 904983 | 6386.99 |
| cell envelope biogenesis protein tola | ASC78_20010 | Not Available | - | 905138 - 905461 | 10861.8 |
| isocitrate dehydrogenase | ASC78_20015 | Q02NB5 | + | 905683 - 906942 | 45809.2 |
| atp-dependent clp protease adaptor clps | ASC78_20020 | C5CLL8 | + | 907332 - 907691 | 13150.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.