Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASC78_00365 | Not Available | - | 90306 - 91481 | 41885.2 |
| hypothetical protein | ASC78_00370 | Not Available | + | 91691 - 92005 | 11374.6 |
| histidine kinase | ASC78_00375 | Q3Z1N3 | - | 92053 - 93483 | 54545.2 |
| hypothetical protein | ASC78_00380 | Not Available | - | 93640 - 93951 | 11887.1 |
| hypothetical protein | ASC78_00385 | Not Available | - | 94105 - 94674 | 21448.7 |
| transcriptional regulator | ASC78_00390 | P32425 | - | 94837 - 95532 | 25566.0 |
| dihydroxy-acid dehydratase | ASC78_00395 | P0DOV7 | + | 95616 - 97343 | 62949.8 |
| hypothetical protein | ASC78_00400 | Q46DA4 | + | 97364 - 98074 | 25700.8 |
| abc transporter substrate-binding protein | ASC78_00405 | Not Available | + | 98117 - 99112 | 34942.7 |
| lysr family transcriptional regulator | ASC78_00410 | Not Available | - | 99131 - 100012 | 31356.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.