Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | ASC78_19620 | Q99L04 | + | 828501 - 829403 | 32792.8 |
| endonuclease iii | ASC78_19625 | P0AB84 | - | 829444 - 830091 | 23877.2 |
| aspartate aminotransferase | ASC78_19630 | Q72LL6 | + | 830233 - 831420 | 42348.3 |
| hypothetical protein | ASC78_19635 | Not Available | - | 831425 - 831652 | 7886.76 |
| hypothetical protein | ASC78_19640 | Not Available | + | 831739 - 832062 | 12261.7 |
| lactate dehydrogenase | ASC78_19645 | Not Available | - | 832067 - 833134 | 37625.3 |
| phosphoserine phosphatase | ASC78_19650 | Q12A06 | - | 833131 - 833841 | 25336.9 |
| transcription-repair coupling factor | ASC78_19655 | P30958 | - | 833838 - 837320 | 129285.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASC78_19660 | Not Available | + | 837435 - 838148 | 24755.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASC78_19665 | Q21YT7 | + | 838210 - 838698 | 16896.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.