Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c' | ASC78_19420 | P15452 | - | 787767 - 788072 | 10413.9 |
| hypothetical protein | ASC78_19425 | Not Available | + | 788181 - 788435 | 9739.09 |
| hypothetical protein | ASC78_19430 | Not Available | + | 788486 - 789307 | 29288.6 |
| dihydroxy-acid dehydratase | ASC78_19435 | A1WMU5 | - | 789315 - 791009 | 59319.7 |
| lysr family transcriptional regulator | ASC78_19440 | Not Available | + | 791112 - 792050 | 34090.7 |
| prolipoprotein diacylglyceryl transferase | ASC78_19445 | Q12BS8 | + | 792105 - 792926 | 30971.3 |
| gntr family transcriptional regulator | ASC78_19450 | Not Available | + | 793051 - 793719 | 25102.2 |
| malonyl-coa decarboxylase | ASC78_19455 | P12617 | + | 793769 - 795244 | 54662.5 |
| abc transporter substrate-binding protein | ASC78_19460 | Not Available | + | 795323 - 796315 | 34730.8 |
| enoyl-coa hydratase | ASC78_19465 | P64019 | + | 796315 - 797094 | 27747.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.