Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal protein | ASC78_19355 | Not Available | - | 775769 - 777622 | 66713.2 |
| enoyl-coa hydratase | ASC78_19360 | A4YI89 | + | 777718 - 778545 | 28847.9 |
| hypothetical protein | ASC78_19365 | Not Available | + | 778810 - 779121 | 11308.7 |
| alanine racemase | ASC78_19370 | O82872 | - | 779149 - 780291 | 40039.1 |
| hypothetical protein | ASC78_19375 | Not Available | - | 780415 - 780780 | 12790.4 |
| Trna-arg | Not Available | Not Available | + | 780819 - 780895 | Not Available |
| cytochrome c precursor | ASC78_19385 | Not Available | - | 780954 - 781484 | 18960.9 |
| copper-binding protein | ASC78_19395 | Not Available | - | 784297 - 784488 | 6739.04 |
| hypothetical protein | ASC78_19400 | Not Available | - | 784824 - 785609 | 29406.0 |
| signal transduction histidine kinase | ASC78_19415 | Not Available | + | 787239 - 787739 | 18560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.