Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ASC78_00310 | Q05202 | - | 78466 - 80580 | 75929.6 |
| deaminase | ASC78_00315 | Not Available | + | 81116 - 81676 | 20649.8 |
| hypothetical protein | ASC78_00320 | Not Available | - | 81861 - 82124 | 8758.76 |
| hypothetical protein | ASC78_00325 | Not Available | - | 82121 - 82447 | 12529.8 |
| hypothetical protein | ASC78_00330 | Not Available | - | 82480 - 83196 | 27203.4 |
| hypothetical protein | ASC78_00335 | Not Available | - | 83198 - 83893 | 26155.4 |
| hypothetical protein | ASC78_00340 | Not Available | - | 83896 - 84417 | 18446.7 |
| hypothetical protein | ASC78_00345 | Not Available | - | 84424 - 84930 | 19140.8 |
| hypothetical protein | ASC78_00355 | Not Available | - | 87149 - 87643 | 17596.6 |
| diguanylate cyclase | ASC78_00360 | Q8X8Q3 | + | 88520 - 89989 | 54222.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.