Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyxoylase | ASC78_19200 | Not Available | - | 747889 - 748338 | 16580.6 |
| cystathionine beta-lyase | ASC78_19205 | Q52811 | + | 748478 - 749671 | 42921.3 |
| hypothetical protein | ASC78_19210 | Not Available | + | 749828 - 750031 | 7464.81 |
| arylesterase | ASC78_19215 | Q9HZY8 | - | 750112 - 750792 | 23782.9 |
| abc transporter | ASC78_19220 | Q7NTU0 | + | 750791 - 751513 | 25654.9 |
| hypothetical protein | ASC78_19225 | Not Available | + | 751510 - 752490 | 36326.3 |
| 23s rrna methyltransferase | ASC78_19230 | Q8Y016 | + | 752524 - 753270 | 26269.8 |
| fad-dependent oxidoreductase | ASC78_19235 | Q2NER9 | - | 753281 - 754489 | 43406.7 |
| lysr family transcriptional regulator | ASC78_19240 | Not Available | - | 754600 - 754770 | 5775.31 |
| acetyltransferase | ASC78_19250 | Q9HUU7 | + | 755254 - 755775 | 18602.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.