Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| propionate--coa ligase | ASC78_19050 | P55912 | + | 713709 - 715622 | 69459.1 |
| 2-oxoglutarate dehydrogenase subunit e1 | ASC78_19055 | Q59106 | + | 715803 - 718679 | 106266.0 |
| dihydrolipoamide succinyltransferase | ASC78_19060 | P52993 | + | 718732 - 719994 | 43685.8 |
| dihydrolipoamide dehydrogenase | ASC78_19065 | P52992 | + | 720009 - 721439 | 50297.4 |
| atpase | ASC78_19070 | P64613 | + | 721444 - 722544 | 42265.0 |
| hypothetical protein | ASC78_19075 | Not Available | + | 722541 - 723206 | 24736.7 |
| serine/threonine protein phosphatase | ASC78_19080 | Not Available | - | 723257 - 724027 | 28109.9 |
| hypothetical protein | ASC78_19085 | Not Available | + | 724134 - 724337 | 7827.46 |
| helicase | ASC78_19090 | P44680 | + | 724334 - 726391 | 74954.6 |
| competence protein coml | ASC78_19095 | Q9JVB7 | - | 726487 - 727293 | 30207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.