Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASC78_19000 | P23221 | - | 699807 - 700436 | 23230.2 |
| pas domain-containing sensor histidine kinase | ASC78_19005 | Not Available | - | 700433 - 702976 | 94328.1 |
| pyruvate dehydrogenase | ASC78_19010 | Not Available | + | 703186 - 705900 | 101156.0 |
| dihydrolipoamide acetyltransferase | ASC78_19015 | Not Available | + | 705951 - 707609 | 56340.9 |
| mfs transporter | ASC78_19020 | Not Available | + | 707606 - 708199 | 21638.8 |
| dihydrolipoamide dehydrogenase | ASC78_19025 | Not Available | + | 708196 - 710022 | 63127.4 |
| hydrolase nlp/p60 | ASC78_19030 | P76190 | - | 710121 - 710705 | 21199.2 |
| hypothetical protein | ASC78_19035 | P75804 | + | 710947 - 712077 | 40598.6 |
| esterase | ASC78_19040 | Not Available | - | 712086 - 712883 | 28783.8 |
| isochorismatase | ASC78_19045 | Q5U3Z3 | + | 712952 - 713554 | 22093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.