Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ASC78_00260 | Not Available | + | 67042 - 67761 | 27070.3 |
| glyoxalase | ASC78_00265 | Not Available | + | 67797 - 68363 | 20987.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC78_00270 | B2RYW9 | + | 68410 - 69273 | 31281.4 |
| mfs transporter | ASC78_00275 | Not Available | + | 69343 - 70314 | 33885.1 |
| hypothetical protein | ASC78_00280 | Not Available | + | 70325 - 70903 | 20808.3 |
| alcohol dehydrogenase | ASC78_00285 | P40783 | + | 70903 - 71925 | 35562.5 |
| acyl-coa dehydrogenase | ASC78_00290 | Q5ZHT1 | + | 72059 - 73294 | 45950.2 |
| hypothetical protein | ASC78_00295 | P0A4T8 | + | 73503 - 74543 | 37976.6 |
| carotenoid oxygenase | ASC78_00300 | Q53353 | + | 74564 - 76003 | 53143.2 |
| nitric oxide synthase | ASC78_00305 | P52674 | - | 76011 - 78452 | 88891.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.