Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luciferase | ASC78_18350 | D0LI58 | + | 5726187 - 5727248 | 38993.8 |
| hypothetical protein | ASC78_18355 | P0ADI8 | + | 5727245 - 5727886 | 22774.7 |
| peptidase m20 | ASC78_18360 | D3WZ85 | + | 5727879 - 5729228 | 48899.3 |
| hypothetical protein | ASC78_18365 | Q0S808 | + | 5729228 - 5729746 | 18104.8 |
| hypothetical protein | ASC78_18370 | Not Available | - | 5729774 - 5730775 | 36931.1 |
| taurine dioxygenase | ASC78_18375 | Q45423 | - | 5730791 - 5731645 | 31790.9 |
| hypothetical protein | ASC78_18380 | Not Available | - | 5731800 - 5732927 | 40433.2 |
| l-glyceraldehyde 3-phosphate reductase | ASC78_18385 | Q46851 | - | 5733132 - 5734175 | 38530.9 |
| hypothetical protein | ASC78_18390 | Not Available | - | 5734646 - 5734873 | 8213.61 |
| hypothetical protein | ASC78_18395 | Not Available | + | 5735182 - 5735472 | 10607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.