Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase | ASC78_02605 | Not Available | + | 562573 - 562977 | 14834.4 |
| glutathione s-transferase | ASC78_02610 | Not Available | + | 563029 - 563682 | 24172.1 |
| hypothetical protein | ASC78_02615 | Not Available | - | 563767 - 564177 | 14992.8 |
| dehalogenase | ASC78_02620 | Not Available | + | 564457 - 565122 | 24744.9 |
| hypothetical protein | ASC78_02625 | Not Available | + | 565122 - 566225 | 39876.4 |
| 4-aminobutyrate aminotransferase | ASC78_02630 | Q8BWU8 | + | 566222 - 567574 | 48040.0 |
| asnc family transcriptional regulator | ASC78_02635 | Not Available | + | 567590 - 568090 | 18780.6 |
| hypothetical protein | ASC78_18440 | Not Available | - | 568712 - 570292 | 54353.0 |
| hypothetical protein | ASC78_18445 | Not Available | + | 570919 - 571479 | 20523.8 |
| hypothetical protein | ASC78_18450 | Not Available | - | 571517 - 573241 | 62438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.