Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arti protein | ASC78_17600 | Q01269 | - | 5565068 - 5565865 | 28768.6 |
| 4-hydroxyphenylpyruvate dioxygenase | ASC78_17605 | P80064 | - | 5565894 - 5567021 | 41756.7 |
| asnc family transcriptional regulator | ASC78_17610 | Not Available | + | 5567179 - 5567652 | 17740.6 |
| gcn5 family acetyltransferase | ASC78_17615 | Not Available | + | 5567762 - 5568490 | 26638.9 |
| magnesium/cobalt efflux protein | ASC78_17620 | Q9KTE3 | + | 5568580 - 5569458 | 32209.2 |
| acyltransferase | ASC78_17625 | A1WJU9 | + | 5569458 - 5571047 | 56303.5 |
| fad-binding protein | ASC78_17630 | Not Available | - | 5571063 - 5572436 | 49755.2 |
| abc transporter atp-binding protein | ASC78_17635 | Q9K9G6 | - | 5572448 - 5573254 | 29096.8 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | ASC78_17640 | Not Available | - | 5573251 - 5574081 | 30478.3 |
| abc transporter substrate-binding protein | ASC78_17645 | Not Available | - | 5574092 - 5575078 | 35629.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.