Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | ASC78_02550 | Not Available | - | 549870 - 550682 | 29375.7 |
| hypothetical protein | ASC78_02555 | Not Available | - | 550758 - 551717 | 36054.4 |
| glycosyl transferase family 2 | ASC78_02560 | Q9RQP9 | - | 551714 - 553051 | 49776.2 |
| ribonuclease bn | ASC78_02570 | Not Available | - | 553772 - 554908 | 40166.6 |
| diguanylate cyclase | ASC78_02575 | Q55434 | - | 555040 - 556572 | 56044.1 |
| esterase | ASC78_02580 | Not Available | + | 556772 - 558541 | 60393.7 |
| molybdenum abc transporter substrate-binding protein | ASC78_02585 | A0A0A1H8I4 | - | 558586 - 559266 | 22722.5 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | ASC78_02590 | Q9AQI0 | - | 559317 - 560018 | 24615.7 |
| 4-oxalomesaconate hydratase | ASC78_02595 | G2IQQ5 | - | 560023 - 561051 | 38622.1 |
| lysr family transcriptional regulator | ASC78_02600 | Q88JX7 | + | 561247 - 562539 | 46216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.