Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_17385 | Not Available | + | 5512518 - 5513198 | 23957.5 |
| arginase | ASC78_17390 | Q7M0Z3 | - | 5513215 - 5514144 | 32767.1 |
| prolyl oligopeptidase | ASC78_17395 | P55577 | - | 5514141 - 5516192 | 76661.4 |
| acyltransferase | ASC78_17400 | P9WKC6 | + | 5516369 - 5518048 | 59448.1 |
| hypothetical protein | ASC78_17405 | Not Available | + | 5518186 - 5518740 | 19181.2 |
| poly granule associated family protein | ASC78_17410 | Not Available | + | 5518758 - 5519279 | 18026.9 |
| tetr family transcriptional regulator | ASC78_17415 | Not Available | + | 5519321 - 5519956 | 23357.1 |
| alpha/beta hydrolase | ASC78_17420 | Not Available | + | 5520043 - 5520816 | 27589.3 |
| nadph--cytochrome reductase | ASC78_17425 | O08336 | - | 5520833 - 5524051 | 118608.0 |
| amino acid abc transporter substrate-binding protein | ASC78_17430 | Q2YL86 | - | 5524174 - 5525439 | 45213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.