Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i restriction endonuclease subunit m | ASC78_17285 | P75436 | + | 5488394 - 5490013 | 60811.6 |
| hypothetical protein | ASC78_17290 | Not Available | - | 5490082 - 5490276 | 6700.01 |
| hypothetical protein | ASC78_17295 | Not Available | - | 5490452 - 5493445 | 111345.0 |
| hypothetical protein | ASC78_17300 | P44169 | - | 5493708 - 5495891 | 82403.6 |
| hypothetical protein | ASC78_17305 | Not Available | + | 5496102 - 5496326 | 8743.9 |
| lysr family transcriptional regulator | ASC78_17310 | P16931 | - | 5497534 - 5498436 | 31899.3 |
| fmn-dependent nadh-azoreductase | ASC78_17315 | Q4KF31 | + | 5498546 - 5499178 | 23413.5 |
| glutathione s-transferase | ASC78_17320 | Not Available | + | 5499232 - 5499966 | 27279.2 |
| 16s rrna methyltransferase | ASC78_17325 | P67088 | - | 5499969 - 5500916 | 32820.1 |
| hypothetical protein | ASC78_17330 | A1WFK6 | + | 5500967 - 5501344 | 13685.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.