Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_17135 | Not Available | - | 5457838 - 5458767 | 31159.6 |
| hypothetical protein | ASC78_17140 | Not Available | - | 5458780 - 5459373 | 22130.2 |
| hypothetical protein | ASC78_17145 | Not Available | + | 5459429 - 5460196 | 27521.4 |
| isochorismatase | ASC78_17150 | Not Available | - | 5460201 - 5460875 | 25010.7 |
| abc transporter permease | ASC78_17155 | Not Available | - | 5460872 - 5461804 | 32364.4 |
| abc transporter permease | ASC78_17160 | D4GPW2 | - | 5461801 - 5462952 | 41403.1 |
| abc transporter atp-binding protein | ASC78_17165 | Not Available | - | 5462945 - 5464477 | 53983.9 |
| hypothetical protein | ASC78_17170 | Not Available | - | 5464491 - 5465597 | 39277.8 |
| glyoxalase | ASC78_17175 | Not Available | - | 5465659 - 5466045 | 14423.3 |
| 2og-fe(ii) oxygenase | ASC78_17180 | Q4W946 | - | 5466048 - 5467049 | 36808.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.