Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_17085 | Not Available | + | 5446579 - 5447172 | 22337.8 |
| hypothetical protein | ASC78_17090 | Not Available | + | 5447169 - 5447558 | 14569.7 |
| nad synthetase | ASC78_17095 | Q9CBZ6 | + | 5447664 - 5449745 | 76200.7 |
| hypothetical protein | ASC78_17100 | Not Available | + | 5449881 - 5450384 | 17790.5 |
| dna ligase-associated dexh box helicase | ASC78_17105 | B1ZZL9 | + | 5450455 - 5451567 | 39753.7 |
| atp-dependent dna ligase | ASC78_17110 | Q1II25 | + | 5451564 - 5453219 | 61693.4 |
| dna ligase-associated dexh box helicase | ASC78_17115 | O27830 | + | 5453216 - 5455969 | 100066.0 |
| thioredoxin | ASC78_17120 | P52228 | - | 5455980 - 5456429 | 16241.5 |
| dead/deah box helicase | ASC78_17125 | Not Available | + | 5456521 - 5457195 | 24211.1 |
| hypothetical protein | ASC78_17130 | Not Available | - | 5457317 - 5457835 | 19373.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.