Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_00210 | Not Available | + | 56136 - 56795 | 24249.6 |
| transporter | ASC78_00215 | Not Available | - | 56814 - 60035 | 102742.0 |
| hypothetical protein | ASC78_00220 | Not Available | + | 60429 - 60773 | 11518.5 |
| iclr family transcriptional regulator | ASC78_00225 | Not Available | - | 60763 - 61554 | 27926.0 |
| abc transporter substrate-binding protein | ASC78_00230 | P37676 | + | 61672 - 62679 | 36685.3 |
| 3-dehydroquinate dehydratase | ASC78_00235 | A7NQC5 | + | 62703 - 63149 | 16042.4 |
| hypothetical protein | ASC78_00240 | Not Available | - | 63177 - 63593 | 15521.5 |
| hypothetical protein | ASC78_00245 | Q0SFL5 | - | 63590 - 65230 | 60074.2 |
| alcohol dehydrogenase | ASC78_00250 | P12311 | + | 65365 - 66474 | 39550.6 |
| hypothetical protein | ASC78_00255 | Not Available | + | 66483 - 67034 | 19092.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.