Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_16580 | Not Available | + | 5360919 - 5361368 | 16084.0 |
| queuine trna-ribosyltransferase | ASC78_16585 | A9BRD7 | - | 5361390 - 5362586 | 44463.5 |
| hypothetical protein | ASC78_16590 | Not Available | - | 5362583 - 5363824 | 44241.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ASC78_16595 | Q47AX4 | - | 5363821 - 5364864 | 38178.7 |
| atp-dependent dna helicase recg | ASC78_16600 | Q8XD86 | + | 5364948 - 5367077 | 77190.5 |
| lysr family transcriptional regulator | ASC78_16605 | Q9X725 | + | 5367173 - 5368138 | 35673.6 |
| dna starvation/stationary phase protection protein | ASC78_16610 | P73321 | + | 5368334 - 5368861 | 19405.1 |
| 4-hydroxybenzoate octaprenyltransferase | ASC78_16615 | Q12GA4 | + | 5368931 - 5369791 | 31173.3 |
| pyrroline-5-carboxylate reductase | ASC78_16620 | P22008 | - | 5369813 - 5370670 | 29449.3 |
| hypothetical protein | ASC78_16625 | Not Available | - | 5370667 - 5371800 | 40902.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.