Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotidine 5'-phosphate decarboxylase | ASC78_16530 | C5CQB2 | + | 5351833 - 5352657 | 29202.9 |
| cro/cl family transcriptional regulator | ASC78_16535 | Not Available | - | 5352674 - 5353408 | 27932.0 |
| hypothetical protein | ASC78_16540 | Not Available | + | 5353549 - 5354406 | 30246.2 |
| glycerol acyltransferase | ASC78_16545 | Not Available | + | 5354457 - 5356412 | 70432.5 |
| hypothetical protein | ASC78_16550 | Not Available | + | 5356561 - 5357067 | 18644.5 |
| hypothetical protein | ASC78_16555 | Not Available | + | 5357111 - 5357578 | 14974.3 |
| hypothetical protein | ASC78_16560 | Not Available | + | 5357575 - 5358369 | 29132.1 |
| serine endopeptidase | ASC78_16565 | Not Available | + | 5358416 - 5359525 | 41058.4 |
| hypothetical protein | ASC78_16570 | Not Available | + | 5359616 - 5359990 | 12692.3 |
| 3-oxoacyl-acp reductase | ASC78_16575 | P0DOV5 | - | 5360062 - 5360853 | 27720.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.