Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_16430 | Not Available | + | 5333362 - 5334072 | 25867.6 |
| hypothetical protein | ASC78_16435 | Not Available | + | 5334069 - 5335106 | 37869.1 |
| hypothetical protein | ASC78_16440 | Not Available | + | 5335158 - 5335682 | 19281.2 |
| 1-aminocyclopropane-1-carboxylate deaminase | ASC78_16445 | C5CQC9 | - | 5335756 - 5336772 | 36898.2 |
| asnc family transcriptional regulator | ASC78_16450 | O07920 | + | 5336924 - 5337433 | 18570.8 |
| fructose-1,6-bisphosphate aldolase | ASC78_16455 | Q56815 | + | 5337568 - 5338632 | 38642.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | ASC78_16460 | Q122N0 | + | 5338737 - 5339642 | 32898.5 |
| heat-shock protein | ASC78_16465 | Not Available | - | 5339683 - 5340123 | 14793.7 |
| thioredoxin | ASC78_16470 | P00275 | - | 5340336 - 5341256 | 33806.4 |
| n5-carboxyaminoimidazole ribonucleotide mutase | ASC78_16475 | Q9KVT7 | + | 5341293 - 5341838 | 18241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.