Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase | ASC78_15980 | P80865 | + | 5230106 - 5230999 | 31123.8 |
| hypothetical protein | ASC78_15985 | O31603 | + | 5231099 - 5231785 | 23939.2 |
| protein phosphatase | ASC78_15990 | Q92AI7 | + | 5231812 - 5232621 | 28724.2 |
| hypothetical protein | ASC78_15995 | Not Available | + | 5232691 - 5233344 | 22703.5 |
| guanylate cyclase | ASC78_16000 | Not Available | + | 5233414 - 5235678 | 80933.0 |
| 3',5'-cyclic-nucleotide phosphodiesterase | ASC78_16005 | Not Available | + | 5235708 - 5236511 | 29052.9 |
| hypothetical protein | ASC78_16010 | O30583 | + | 5236719 - 5237258 | 18439.2 |
| hypothetical protein | ASC78_16015 | Not Available | - | 5237847 - 5238422 | 20034.6 |
| pilus assembly protein pile | ASC78_16020 | Not Available | - | 5238419 - 5238883 | 16710.3 |
| pilus assembly protein pily | ASC78_16025 | Q87FA5 | - | 5238880 - 5243196 | 151572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.