Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_15880 | Not Available | - | 5211734 - 5212054 | 11913.0 |
| atp-dependent rna helicase | ASC78_15885 | P21693 | - | 5212410 - 5213861 | 52514.2 |
| translation initiation factor if-1 | ASC78_15890 | A1TRD3 | - | 5213947 - 5214219 | 10190.3 |
| hypothetical protein | ASC78_15895 | Not Available | - | 5214281 - 5214547 | 9534.56 |
| ap endonuclease | ASC78_15900 | Not Available | - | 5214935 - 5215990 | 38809.9 |
| peptidase c26 | ASC78_15905 | Q9CE00 | + | 5216118 - 5217005 | 33034.2 |
| hypothetical protein | ASC78_15910 | Not Available | - | 5217018 - 5217203 | 5802.8 |
| dna topoisomerase iii | ASC78_15915 | Q81IH1 | - | 5217274 - 5220228 | 108227.0 |
| lysine methyltransferase | ASC78_15920 | P55200 | + | 5220316 - 5220957 | 24154.5 |
| biotin--acetyl-coa-carboxylase ligase | ASC78_15925 | P06709 | + | 5220960 - 5221784 | 29336.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.