Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_15775 | Not Available | - | 5192684 - 5193022 | 12048.1 |
| peptidase m4 | ASC78_15780 | Q99132 | - | 5193019 - 5194089 | 38463.2 |
| hypothetical protein | ASC78_15785 | Not Available | + | 5194234 - 5194524 | 10721.1 |
| pirin | ASC78_15790 | Not Available | - | 5194547 - 5195623 | 39008.9 |
| extradiol dioxygenase | ASC78_15795 | Not Available | - | 5195781 - 5196197 | 15261.1 |
| amidase | ASC78_15800 | Q936X3 | - | 5196298 - 5197677 | 47565.3 |
| metal-chelation protein chad | ASC78_15805 | Not Available | + | 5197694 - 5199310 | 58817.3 |
| peptidylprolyl isomerase | ASC78_15810 | O83369 | - | 5199329 - 5199805 | 17432.0 |
| lysr family transcriptional regulator | ASC78_15815 | Not Available | - | 5199844 - 5200770 | 33049.1 |
| doxx family protein | ASC78_15820 | Not Available | + | 5200856 - 5201242 | 13397.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.