Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| guanine-specific ribonuclease n1 and t1 | ASC78_15675 | P30289 | - | 5172085 - 5172495 | 14864.5 |
| malate dehydrogenase | ASC78_15680 | Not Available | - | 5172675 - 5175017 | 84934.0 |
| hypothetical protein | ASC78_15685 | Not Available | + | 5175184 - 5176233 | 37904.7 |
| hypothetical protein | ASC78_15690 | Not Available | + | 5176243 - 5177721 | 52886.2 |
| hypothetical protein | ASC78_15695 | Not Available | + | 5177781 - 5177999 | 7801.98 |
| spermidine synthase | ASC78_15700 | Q8XQC8 | + | 5178014 - 5179555 | 56344.1 |
| fumarate reductase | ASC78_15705 | Not Available | + | 5179562 - 5181172 | 58194.1 |
| saccharopine dehydrogenase | ASC78_15710 | Not Available | + | 5181169 - 5182302 | 39901.2 |
| hypothetical protein | ASC78_15715 | Not Available | + | 5182283 - 5182789 | 19160.8 |
| epimerase | ASC78_15720 | Not Available | + | 5182786 - 5183163 | 13627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.