Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | ASC78_02340 | Not Available | - | 507695 - 508180 | 17746.7 |
| hypothetical protein | ASC78_02345 | Not Available | - | 508177 - 508965 | 28101.9 |
| hypothetical protein | ASC78_02350 | Q88P61 | - | 508962 - 509804 | 31028.5 |
| hypothetical protein | ASC78_02355 | Not Available | - | 509830 - 510117 | 9619.77 |
| mbl fold metallo-hydrolase | ASC78_02360 | Q3JRV4 | - | 510324 - 511214 | 32262.4 |
| arsr family transcriptional regulator | ASC78_02365 | Q8UAA8 | + | 511331 - 511657 | 12057.8 |
| yeee/yede | ASC78_02370 | Q9PFB2 | + | 511654 - 512088 | 14900.6 |
| hypothetical protein | ASC78_02375 | Not Available | + | 512100 - 512582 | 16780.0 |
| crp/fnr family transcriptional regulator | ASC78_02380 | P0A2T9 | - | 512645 - 513448 | 29399.4 |
| ornithine carbamoyltransferase | ASC78_02385 | Q936V7 | + | 513668 - 514177 | 18122.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.