Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | ASC78_15375 | P08368 | + | 5109361 - 5110146 | 28725.5 |
| histidine kinase | ASC78_15380 | P08401 | + | 5110143 - 5111588 | 53662.6 |
| hypothetical protein | ASC78_15385 | Not Available | - | 5111597 - 5112202 | 22668.4 |
| penicillin-binding protein | ASC78_15390 | O87626 | - | 5112291 - 5114681 | 87114.9 |
| hypothetical protein | ASC78_15395 | P08369 | - | 5114720 - 5116195 | 53172.7 |
| trypsin | ASC78_15400 | E9PYK3 | + | 5116403 - 5118484 | 75737.6 |
| exosortase | ASC78_15405 | Not Available | + | 5118510 - 5119439 | 32682.8 |
| hypothetical protein | ASC78_15410 | Not Available | + | 5119420 - 5119989 | 21323.6 |
| glycosyl transferase | ASC78_15415 | A1K3B8 | + | 5119997 - 5121265 | 45659.3 |
| gcn5 family acetyltransferase | ASC78_15420 | Not Available | + | 5121262 - 5122014 | 27471.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.