Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein minc | ASC78_15175 | Q7NSP5 | + | 5073916 - 5074689 | 26639.0 |
| septum site-determining protein mind | ASC78_15180 | P0AEZ5 | + | 5074746 - 5075561 | 29266.4 |
| cell division topological specificity factor mine | ASC78_15185 | C5CW30 | + | 5075565 - 5075843 | 10492.8 |
| lysophospholipase | ASC78_15190 | Not Available | - | 5075895 - 5076815 | 33328.1 |
| tetr family transcriptional regulator | ASC78_15195 | Not Available | - | 5077022 - 5077624 | 22267.8 |
| transcriptional regulator | ASC78_15200 | B4E8S9 | + | 5077808 - 5078752 | 34597.8 |
| hypothetical protein | ASC78_15205 | Not Available | + | 5078867 - 5079130 | 9599.29 |
| hypothetical protein | ASC78_15210 | Not Available | - | 5079228 - 5079689 | 17293.1 |
| deaminase | ASC78_15215 | Not Available | - | 5079812 - 5080402 | 21820.1 |
| hxlr family transcriptional regulator | ASC78_15220 | Not Available | + | 5080518 - 5080946 | 15827.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.