Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASC78_15025 | Q57306 | + | 5043097 - 5043888 | 27832.8 |
| cyclase | ASC78_15030 | Not Available | + | 5043931 - 5044737 | 29957.5 |
| fumarylacetoacetase | ASC78_15035 | Q6H7M1 | + | 5044760 - 5046079 | 47513.2 |
| Trna-gly | Not Available | Not Available | + | 5046138 - 5046213 | Not Available |
| adhesin | ASC78_15045 | Not Available | + | 5046460 - 5046987 | 15147.7 |
| acyl dehydratase | ASC78_15050 | Not Available | - | 5047058 - 5047501 | 16468.7 |
| benzoyl-coa oxygenase | ASC78_15055 | Q9AIX6 | - | 5047512 - 5048804 | 46595.5 |
| benzoyl-coa oxygenase subunit b | ASC78_15060 | Q9AIX7 | - | 5048930 - 5050357 | 53756.6 |
| benzoyl-coa-dihydrodiol lyase | ASC78_15065 | Q84HH6 | - | 5050393 - 5052069 | 60798.3 |
| transcriptional regulator | ASC78_15070 | A4XLN3 | - | 5052197 - 5053141 | 33919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.