Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_02285 | Not Available | + | 497737 - 497979 | 8624.49 |
| toxin hipa | ASC78_02290 | Not Available | + | 497981 - 499321 | 49035.8 |
| hypothetical protein | ASC78_02295 | Not Available | + | 499436 - 500068 | 24183.9 |
| hypothetical protein | ASC78_02300 | Q0VZ70 | + | 500133 - 501746 | 58044.1 |
| hypothetical protein | ASC78_02305 | O27190 | + | 501762 - 502622 | 30251.0 |
| hypothetical protein | ASC78_02310 | Not Available | - | 502663 - 502959 | 10860.7 |
| lysr family transcriptional regulator | ASC78_02315 | P39376 | - | 503031 - 503930 | 32737.3 |
| mandelate racemase | ASC78_02320 | Q89FH0 | + | 504033 - 505199 | 43391.9 |
| hypothetical protein | ASC78_02325 | Not Available | + | 505229 - 506206 | 34319.6 |
| hypothetical protein | ASC78_02335 | Not Available | + | 507254 - 507673 | 15591.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.