Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_14825 | Not Available | - | 5002951 - 5003499 | 19372.3 |
| lysr family transcriptional regulator | ASC78_14830 | Not Available | + | 5003607 - 5004587 | 35949.4 |
| metallophosphoesterase | ASC78_14835 | Not Available | + | 5004897 - 5005703 | 29508.2 |
| phospholipase | ASC78_14840 | Q9ZMP2 | - | 5005706 - 5007289 | 57880.6 |
| hypothetical protein | ASC78_14845 | P35158 | + | 5007363 - 5008592 | 43129.1 |
| hypothetical protein | ASC78_14850 | Not Available | + | 5008633 - 5009343 | 25576.8 |
| hypothetical protein | ASC78_14855 | Not Available | - | 5009340 - 5012309 | 102201.0 |
| short-chain dehydrogenase | ASC78_14860 | Not Available | - | 5012306 - 5013226 | 32947.2 |
| abc transporter substrate-binding protein | ASC78_14865 | Not Available | - | 5013255 - 5014220 | 33972.0 |
| flavin reductase | ASC78_14870 | Q6Q271 | + | 5014495 - 5015004 | 17903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.