Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASC78_14775 | Not Available | - | 4987809 - 4988777 | 34055.2 |
| atp-dependent dna helicase recq | ASC78_14780 | P15043 | + | 4989071 - 4990966 | 69298.0 |
| lysr family transcriptional regulator | ASC78_14785 | P52670 | + | 4990980 - 4991876 | 32001.7 |
| laci family transcriptional regulator | ASC78_14790 | Not Available | - | 4991960 - 4992955 | 34286.6 |
| hypothetical protein | ASC78_14795 | Not Available | - | 4992942 - 4993787 | 30118.9 |
| nucleoside hydrolase | ASC78_14800 | B7LAI5 | - | 4993909 - 4995105 | 42361.5 |
| peptidase s41 | ASC78_14805 | Not Available | - | 4995252 - 4996850 | 54985.8 |
| atpase | ASC78_14810 | Q3V4U3 | - | 4996931 - 4999258 | 85715.6 |
| threonine dehydratase | ASC78_14815 | Not Available | + | 4999366 - 5000598 | 43468.7 |
| phosphoenolpyruvate carboxykinase | ASC78_14820 | B2U804 | + | 5000987 - 5002855 | 68526.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.