Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_02180 | Not Available | + | 475269 - 475865 | 20090.9 |
| twin-arginine translocation pathway signal protein | ASC78_02185 | Not Available | - | 475889 - 476869 | 34297.2 |
| hypothetical protein | ASC78_02190 | O06837 | - | 476925 - 478427 | 53354.9 |
| gmc family oxidoreductase | ASC78_02195 | Q9WWW2 | - | 478475 - 480064 | 56958.4 |
| hypothetical protein | ASC78_02200 | Not Available | - | 480296 - 481381 | 40928.8 |
| 2,4-dihydroxyacetophenone dioxygenase | ASC78_02205 | Not Available | + | 481545 - 482072 | 20097.5 |
| butanediol dehydrogenase | ASC78_02210 | O34788 | + | 482078 - 483136 | 37107.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | ASC78_02215 | Q9X248 | + | 483133 - 483858 | 25316.4 |
| abc transporter substrate-binding protein | ASC78_02220 | Not Available | + | 483906 - 485180 | 45757.1 |
| abc transporter atp-binding protein | ASC78_02225 | P21629 | + | 485177 - 485902 | 26187.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.