Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter acrb | ASC78_13660 | Not Available | + | 4737866 - 4741021 | 114594.0 |
| Trna-leu | Not Available | Not Available | + | 4741122 - 4741208 | Not Available |
| trigger factor | ASC78_13670 | C5CJT3 | + | 4741235 - 4742551 | 48788.1 |
| atp-dependent clp protease proteolytic subunit | ASC78_13675 | C5CJT4 | + | 4742684 - 4743292 | 22271.9 |
| atp-dependent clp protease atp-binding subunit clpx | ASC78_13680 | C5CJT5 | + | 4743414 - 4744679 | 46210.8 |
| dna-binding protein | ASC78_13685 | P0A9M1 | + | 4744799 - 4747237 | 89377.9 |
| Trna-gly | Not Available | Not Available | + | 4747292 - 4747367 | Not Available |
| Trna-cys | Not Available | Not Available | + | 4747432 - 4747505 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4747610 - 4747701 | Not Available |
| hypothetical protein | ASC78_13705 | Not Available | + | 4747724 - 4748356 | 23418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.