Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | ASC78_02130 | Q9K4V0 | + | 463615 - 465195 | 56323.5 |
| lysr family transcriptional regulator | ASC78_02135 | Not Available | - | 465184 - 466308 | 40536.8 |
| formate dehydrogenase | ASC78_02140 | Not Available | + | 466432 - 466896 | 15980.1 |
| formate dehydrogenase | ASC78_02145 | Q46507 | + | 466893 - 468449 | 55159.4 |
| formate dehydrogenase | ASC78_02150 | Q795Y4 | + | 468478 - 471360 | 104730.0 |
| formate dehydrogenase family accessory protein fdhd | ASC78_02155 | C5CP12 | + | 471357 - 472193 | 28981.1 |
| formate dehydrogenase | ASC78_02160 | Not Available | + | 472205 - 472429 | 8619.43 |
| dna-binding protein | ASC78_02165 | Not Available | + | 472476 - 473696 | 42776.9 |
| glutamine cyclotransferase | ASC78_02170 | Not Available | + | 473748 - 474431 | 24022.0 |
| thioredoxin | ASC78_02175 | Not Available | + | 474450 - 475247 | 30261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.