Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | ASC78_01980 | Not Available | - | 431144 - 432127 | 33541.6 |
| mandelate racemase | ASC78_01985 | A9CEQ8 | - | 432156 - 433259 | 39065.9 |
| hypothetical protein | ASC78_01990 | Not Available | - | 433358 - 433786 | 15967.0 |
| oxidoreductase | ASC78_01995 | Not Available | - | 433844 - 434863 | 37260.5 |
| hypothetical protein | ASC78_02000 | Not Available | + | 435031 - 435249 | 7735.23 |
| hypothetical protein | ASC78_02005 | Not Available | - | 435795 - 437039 | 45071.0 |
| hypothetical protein | ASC78_02010 | Q7LYX6 | - | 437152 - 437961 | 29044.8 |
| hypothetical protein | ASC78_02015 | O32261 | - | 437991 - 438902 | 32522.5 |
| hypothetical protein | ASC78_02020 | A1B8Z4 | + | 439051 - 439857 | 28799.2 |
| hypothetical protein | ASC78_02025 | Not Available | + | 439989 - 440666 | 24598.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.