Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | ASC78_00160 | Q6CYU2 | + | 45221 - 46018 | 28685.7 |
| cytochrome c | ASC78_00165 | Not Available | + | 46020 - 47183 | 41180.9 |
| sulfonate abc transporter substrate-binding protein | ASC78_00170 | Not Available | + | 47223 - 48203 | 34523.3 |
| dna-binding protein | ASC78_00175 | Not Available | - | 48208 - 49689 | 53606.8 |
| acetyltransferase | ASC78_00180 | P40586 | + | 49806 - 50522 | 27166.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | ASC78_00185 | A1TLA3 | - | 50543 - 51385 | 30276.6 |
| hypothetical protein | ASC78_00190 | P74409 | + | 51409 - 52719 | 47071.0 |
| serine/threonine protein kinase | ASC78_00195 | Not Available | + | 52727 - 53701 | 34938.7 |
| hypothetical protein | ASC78_00200 | Not Available | + | 53738 - 54709 | 35204.1 |
| adenylosuccinate synthase | ASC78_00205 | Q5F9J5 | + | 54717 - 56075 | 48110.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.