Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-pyrone-4,6-dicarboxylate hydrolase | ASC78_01880 | Q93PS7 | - | 411105 - 411944 | 31171.4 |
| laci family transcriptional regulator | ASC78_01885 | Not Available | - | 412069 - 413028 | 33614.7 |
| hypothetical protein | ASC78_01890 | Q45389 | - | 413168 - 414106 | 33511.3 |
| hypothetical protein | ASC78_01895 | O58885 | - | 414185 - 415366 | 43291.2 |
| threonine aldolase | ASC78_01900 | Q9FPH3 | - | 415404 - 416468 | 37259.7 |
| lysr family transcriptional regulator | ASC78_01905 | Not Available | + | 416588 - 417466 | 32265.3 |
| hypothetical protein | ASC78_01910 | Not Available | - | 417634 - 418572 | 34205.7 |
| hypothetical protein | ASC78_01915 | Not Available | + | 418682 - 419656 | 34356.7 |
| hypothetical protein | ASC78_01920 | A1JMX1 | + | 419659 - 420462 | 29583.4 |
| hypothetical protein | ASC78_01925 | Not Available | - | 420437 - 420640 | 7262.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.