Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_01825 | Not Available | - | 395535 - 395945 | 15326.9 |
| gamma-glutamyltransferase | ASC78_01830 | Q05053 | - | 395993 - 397606 | 57553.2 |
| amidase | ASC78_01840 | K9NBS6 | - | 398534 - 400015 | 53700.5 |
| hypothetical protein | ASC78_01845 | Not Available | + | 400136 - 401770 | 59419.6 |
| hypothetical protein | ASC78_01850 | O24766 | + | 401854 - 402615 | 27358.0 |
| threonine dehydratase | ASC78_01855 | P53607 | + | 402702 - 404243 | 55606.9 |
| lysr family transcriptional regulator | ASC78_01860 | Not Available | - | 405833 - 406816 | 36666.6 |
| aspartate aminotransferase | ASC78_01865 | Q02635 | + | 406918 - 408147 | 43777.3 |
| abc transporter substrate-binding protein | ASC78_01870 | Not Available | + | 408144 - 409130 | 34495.2 |
| diguanylate cyclase | ASC78_01875 | Not Available | + | 409142 - 409831 | 24108.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.