Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC78_01410 | Q7TYX8 | - | 312252 - 314033 | 64910.9 |
| hypothetical protein | ASC78_01415 | Not Available | - | 314030 - 315136 | 39070.6 |
| abc transporter atp-binding protein | ASC78_01425 | Not Available | - | 316032 - 316796 | 27790.4 |
| hypothetical protein | ASC78_01430 | Not Available | - | 316877 - 317950 | 37815.6 |
| abc transporter permease | ASC78_01435 | Not Available | - | 317955 - 318827 | 30610.7 |
| tetr family transcriptional regulator | ASC78_01440 | Not Available | + | 319048 - 319638 | 21231.3 |
| marr family transcriptional regulator | ASC78_01445 | Not Available | + | 319720 - 320160 | 15706.9 |
| abc transporter substrate-binding protein | ASC78_01455 | Not Available | - | 321528 - 322697 | 41155.5 |
| hypothetical protein | ASC78_01460 | Not Available | - | 322735 - 323115 | 13695.6 |
| dioxygenase | ASC78_01465 | P17296 | - | 323115 - 324038 | 34005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.