Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copg family transcriptional regulator | ASC78_01210 | P55533 | - | 266756 - 266998 | 9007.46 |
| elongation factor g | ASC78_01215 | Q9X1Y4 | + | 267214 - 269274 | 73768.5 |
| hypothetical protein | ASC78_01220 | P0ABR8 | - | 269276 - 270472 | 44414.0 |
| hypothetical protein | ASC78_01225 | Not Available | + | 270706 - 271359 | 23934.2 |
| glutamate synthase | ASC78_01230 | D7AF64 | + | 271475 - 273277 | 65863.8 |
| ferredoxin oxidoreductase | ASC78_01235 | Q9YBX7 | + | 273340 - 275181 | 67399.5 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | ASC78_01240 | Q9YA11 | + | 275178 - 276236 | 37845.0 |
| signal transduction protein | ASC78_01245 | P50100 | + | 276284 - 276721 | 15744.4 |
| antibiotic biosynthesis monooxygenase | ASC78_01250 | Not Available | - | 276734 - 277057 | 11844.0 |
| transcriptional regulator | ASC78_01255 | Not Available | - | 277075 - 277707 | 23409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.