Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root318D1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax sp. Root318D1
Accession NumberLMCQ00000000.1
Gene Summary
Adenine Count
985297 bp
Thymine Count
979533 bp
Guanine Count
1898439 bp
Cytosine Count
1882261 bp
Genome Length
5745828 bp
Protein-coding Genes
5217 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | ASC78_00905 | Q3SV41 | - | 201207 - 202343 | 40391.4 |
| gntr family transcriptional regulator | ASC78_00910 | P77730 | + | 202477 - 203922 | 52307.2 |
| nudix hydrolase | ASC78_00915 | Not Available | + | 203919 - 204395 | 17598.9 |
| 3-oxoacyl-acp reductase | ASC78_00920 | P41177 | - | 204406 - 205194 | 27034.6 |
| hypothetical protein | ASC78_00925 | Not Available | - | 205246 - 206214 | 33825.2 |
| 3-phosphoglycerate dehydrogenase | ASC78_00930 | Not Available | - | 206259 - 207239 | 35290.0 |
| dimethylmenaquinone methyltransferase | ASC78_00935 | Not Available | - | 207252 - 207977 | 25474.8 |
| hypothetical protein | ASC78_00940 | Not Available | - | 207986 - 208465 | 16446.8 |
| hypothetical protein | ASC78_00945 | Not Available | - | 208604 - 209365 | 26639.7 |
| transcriptional regulator | ASC78_00950 | Q9EXL7 | + | 209551 - 210423 | 31921.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.